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Hello! I’m a bioinformatics scientist building tech at the intersection of spatial genomics, AI, and RNA biology.
I currently work at Stellaromics, developing computer vision and AI-driven bioinformatics algorithms for 3D spatial sequencing data. I previously developed multi-omic spatial algorithms at Singular Genomics, and earned my PhD in Bioinformatics & Systems Biology at UC San Diego developing methods to study RNA biology and cancer with spatial omics data (with Dr. Gene Yeo and Dr. Hannah Carter).
I'm also an ambassador for Marimo, a modern & reactive Python notebook. I host workshops to teach people in science how to use Marimo notebooks in their own projects.
I am passionate about building community knowledge to push science forward; These are open-source projects I contribute to:
https://github.com/ckmah/spatial-rx/
https://github.com/YeoLab/bento-tools
https://github.com/scverse/spatialdata
M public work spans science, software and teaching.
Computational Frameworks for Functional Subcellular Analysis of Spatial Transcriptomics Data
https://github.com/ckmah/PhD-Dissertation
clarence.k.mah (at) gmail (dot) com
Send me an email or DM me on Twitter !
I frequently present my work at conferences/scientific events. Please reach out if you find yourself at these events, I would love to connect!